MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Mammaliicoccus sciuri
ACT.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 62
bases: 2,736,455 bps
CDS: 2,710
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,779
Total number of protein coding genes annotated/found:
2,710
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 136 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5014|JADGMB010000050.1
SEQF5014_01584
Genome Viewer
NA
AA
1035/345
21-1055
hypothetical protein
SEQF5014|JADGMB010000024.1
SEQF5014_01866
Genome Viewer
NA
AA
1092/364
25-1116
putative poly-beta-1%2C6-N-acetyl-D-glucosamine export protein
SEQF5014|JADGMB010000059.1
SEQF5014_01863
Genome Viewer
NA
AA
366/122
36-401
hypothetical protein
SEQF5014|JADGMB010000029.1
SEQF5014_01282
Genome Viewer
NA
AA
747/249
40-786
Lactose phosphotransferase system repressor
SEQF5014|JADGMB010000015.1
SEQF5014_02091
Genome Viewer
NA
AA
324/108
52-375
Surface protein
SEQF5014|JADGMB010000054.1
SEQF5014_01594
Genome Viewer
NA
AA
474/158
62-535
hypothetical protein
SEQF5014|JADGMB010000051.1
SEQF5014_01837
Genome Viewer
NA
AA
216/72
82-297
hypothetical protein
SEQF5014|JADGMB010000043.1
SEQF5014_01610
Genome Viewer
NA
AA
879/293
98-976
hypothetical protein
SEQF5014|JADGMB010000016.1
SEQF5014_00001
Genome Viewer
NA
AA
978/326
111-1088
Sporulation kinase D
SEQF5014|JADGMB010000041.1
SEQF5014_01239
Genome Viewer
NA
AA
144/48
171-314
hypothetical protein
SEQF5014|JADGMB010000052.1
SEQF5014_01870
Genome Viewer
NA
AA
453/151
183-635
Peptidyl-lysine N-acetyltransferase YiaC
SEQF5014|JADGMB010000036.1
SEQF5014_00681
Genome Viewer
NA
AA
237/79
205-441
hypothetical protein
SEQF5014|JADGMB010000022.1
SEQF5014_02092
Genome Viewer
NA
AA
165/55
243-79
hypothetical protein
SEQF5014|JADGMB010000014.1
SEQF5014_00100
Genome Viewer
NA
AA
186/62
269-84
hypothetical protein
SEQF5014|JADGMB010000040.1
SEQF5014_01193
Genome Viewer
NA
AA
1434/478
277-1710
putative malate:quinone oxidoreductase 1
SEQF5014|JADGMB010000056.1
SEQF5014_01607
Genome Viewer
NA
AA
393/131
318-710
Glycerol-3-phosphate cytidylyltransferase
SEQF5014|JADGMB010000031.1
SEQF5014_01602
Genome Viewer
NA
AA
621/207
350-970
Threonine efflux protein
SEQF5014|JADGMB010000026.1
SEQF5014_01871
Genome Viewer
NA
AA
339/113
374-36
Immunity protein CdiI
SEQF5014|JADGMB010000037.1
SEQF5014_00582
Genome Viewer
NA
AA
564/188
385-948
Cysteine/O-acetylserine efflux protein
SEQF5014|JADGMB010000046.1
SEQF5014_01576
Genome Viewer
NA
AA
435/145
444-878
hypothetical protein
Items 1 - 20
🡆
click arrow to navigate by page or
of 136 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by